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Summary
- Splice variants
- Transcript comparison
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Gene: ABLIM1 OTTHUMG00000019088

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Description

actin binding LIM protein 1

Synonyms

abLIM, limatin

Location

Chromosome 10: 114,431,113-114,685,003 reverse strand.

VEGA68:CM000672.2

About this gene

This gene has 12 transcripts (splice variants), 3 orthologues and 2 paralogues.

Transcripts

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Name	Transcript ID	bp	Protein	Biotype	CCDS	UniProt	Flags
ABLIM1-002	OTTHUMT00000050470.4	7408	718aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31288	-
ABLIM1-009	OTTHUMT00000050477.2	6841	455aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31289	-
ABLIM1-005	OTTHUMT00000467746.2	3203	748aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81509	-
ABLIM1-001	OTTHUMT00000050469.3	2657	778aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7590	O14639
ABLIM1-010	OTTHUMT00000050478.3	2255	401aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81508	-
ABLIM1-011	OTTHUMT00000050479.2	854	173aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ABLIM1-012	OTTHUMT00000050480.1	541	172aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ABLIM1-004	OTTHUMT00000050472.4	2237	No protein	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ABLIM1-007	OTTHUMT00000050475.1	356	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ABLIM1-006	OTTHUMT00000050474.1	518	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ABLIM1-013	OTTHUMT00000050481.1	498	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ABLIM1-014	OTTHUMT00000050482.1	448	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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