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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
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Gene: ATRNL1 OTTHUMG00000019096

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Description

attractin-like 1

Synonyms

KIAA0534, ALP, FLJ45344

Location

Chromosome 10: 115,093,365-115,948,992 forward strand.

VEGA68:CM000672.2

About this gene

This gene has 11 transcripts (splice variants), 4 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	CCDS	UniProt	Flags
ATRNL1-001	OTTHUMT00000050507.3	8479	1379aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7592	Q5VV63
ATRNL1-002	OTTHUMT00000050508.5	1818	467aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73204	-
ATRNL1-005	OTTHUMT00000384497.2	1583	398aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ATRNL1-009	OTTHUMT00000384496.3	932	252aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ATRNL1-010	OTTHUMT00000384500.2	648	216aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YDQ9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
ATRNL1-006	OTTHUMT00000384498.1	4463	No protein	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ATRNL1-003	OTTHUMT00000050509.5	1701	36aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ATRNL1-004	OTTHUMT00000050510.2	768	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ATRNL1-011	OTTHUMT00000384501.1	569	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ATRNL1-007	OTTHUMT00000384502.1	529	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ATRNL1-008	OTTHUMT00000384499.1	311	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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