This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: PPP2CA OTTHUMG00000129119

.

Description

protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform

Synonyms

PP2Calpha

Location

Chromosome 5: 134,194,334-134,226,142 reverse strand.

VEGA68:CM000667.2

About this gene

This gene has 7 transcripts (splice variants), 11 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	CCDS	UniProt	Flags
PPP2CA-001	OTTHUMT00000251165.1	4649	309aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4173	P67775
PPP2CA-005	OTTHUMT00000381446.2	585	126aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RHP4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PPP2CA-006	OTTHUMT00000381447.2	510	145aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E7ESG8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PPP2CA-002	OTTHUMT00000258883.1	1807	No protein	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PPP2CA-007	OTTHUMT00000381591.1	564	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PPP2CA-003	OTTHUMT00000258884.1	739	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PPP2CA-004	OTTHUMT00000258885.1	574	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

Loading component

Loading component

.

Gene-based displays