Description
protein tyrosine phosphatase, non-receptor type 18 (brain-derived)
Synonyms
BDP1
Location
Chromosome 2: 130,356,007-130,375,409 forward strand.
VEGA68:CM000664.2
About this gene
This gene has 16 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
PTPN18-001 | OTTHUMT00000254523.2 | 3669 | 460aa | OTTHUMP00000162398 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2161 | Q99952 | |
PTPN18-002 | OTTHUMT00000332753.2 | 2472 | 353aa | OTTHUMP00000204517 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46410 | - | |
PTPN18-003 | OTTHUMT00000332754.3 | 993 | 269aa | OTTHUMP00000204518 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EMB8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
PTPN18-006 | OTTHUMT00000332935.1 | 785 | 48aa | OTTHUMP00000204599 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
PTPN18-013 | OTTHUMT00000332942.1 | 599 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PTPN18-004 | OTTHUMT00000332933.1 | 1717 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-012 | OTTHUMT00000332941.1 | 1394 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-010 | OTTHUMT00000332939.1 | 833 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-011 | OTTHUMT00000332940.1 | 759 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-007 | OTTHUMT00000332936.1 | 595 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-009 | OTTHUMT00000332938.1 | 552 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-014 | OTTHUMT00000332943.1 | 513 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-005 | OTTHUMT00000332934.1 | 460 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-016 | OTTHUMT00000332945.1 | 411 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-008 | OTTHUMT00000332937.1 | 398 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PTPN18-015 | OTTHUMT00000332944.1 | 393 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |