Description
chromosome 19 open reading frame 54
Synonyms
FLJ41131
Location
Chromosome 19: 40,740,856-40,751,553 reverse strand.
VEGA68:CM000681.2
About this gene
This gene has 11 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | Flags |
|---|---|---|---|---|---|---|---|
| C19orf54-001 | OTTHUMT00000316701.1 | 2753 | 351aa | OTTHUMP00000196530 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12564 | |
| C19orf54-003 | OTTHUMT00000316703.2 | 2521 | 57aa | OTTHUMP00000270916 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | |
| C19orf54-011 | OTTHUMT00000463111.2 | 553 | 67aa | OTTHUMP00000269871 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | |
| C19orf54-006 | OTTHUMT00000463115.3 | 546 | 182aa | OTTHUMP00000269872 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| C19orf54-010 | OTTHUMT00000463109.1 | 492 | 112aa | OTTHUMP00000269870 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| C19orf54-008 | OTTHUMT00000463116.1 | 369 | 65aa | OTTHUMP00000269873 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| C19orf54-004 | OTTHUMT00000463113.2 | 1019 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | |
| C19orf54-002 | OTTHUMT00000316702.3 | 1792 | 170aa | OTTHUMP00000270917 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| C19orf54-007 | OTTHUMT00000463112.2 | 1104 | 57aa | OTTHUMP00000270918 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| C19orf54-005 | OTTHUMT00000463114.2 | 947 | 57aa | OTTHUMP00000270919 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| C19orf54-009 | OTTHUMT00000463110.1 | 519 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - |
