This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: ATP13A5 OTTHUMG00000156101

.

Description

ATPase type 13A5

Synonyms

FLJ16025

Location

Chromosome 3: 193,274,790-193,459,232 reverse strand.

VEGA68:CM000665.2

About this gene

This gene has 5 transcripts (splice variants), 2 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	CCDS	UniProt	Flags
ATP13A5-001	OTTHUMT00000343012.1	4027	1218aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33914	Q4VNC0
ATP13A5-005	OTTHUMT00000343016.2	569	158aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JPQ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ATP13A5-002	OTTHUMT00000343013.1	2411	No protein	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ATP13A5-004	OTTHUMT00000343015.1	1632	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ATP13A5-003	OTTHUMT00000343014.1	2380	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

Loading component

Loading component

.

Gene-based displays