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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Gene expression
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Gene: HMGXB3 OTTHUMG00000163493

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Description

HMG box domain containing 3

Synonyms

SMF, KIAA0194

Location

Chromosome 5: 150,000,321-150,052,823 forward strand.

VEGA68:CM000667.2

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
HMGXB3-001	OTTHUMT00000373771.1	4974	1292aa	OTTHUMP00000224091	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54935
HMGXB3-002	OTTHUMT00000373770.1	5275	1260aa	OTTHUMP00000224090	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
HMGXB3-004	OTTHUMT00000373772.1	975	112aa	OTTHUMP00000224092	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
HMGXB3-003	OTTHUMT00000373773.1	749	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
HMGXB3-005	OTTHUMT00000373774.1	580	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

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Summary

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