Description
polyamine modulated factor 1 binding protein 1
Location
Chromosome 16: 72,112,157-72,176,878 reverse strand.
VEGA68:CM000678.2
About this gene
This gene has 11 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | Flags |
|---|---|---|---|---|---|---|---|
| PMFBP1-001 | OTTHUMT00000396473.2 | 3527 | 1007aa | OTTHUMP00000236977 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32483 | |
| PMFBP1-003 | OTTHUMT00000396483.2 | 3935 | 1022aa | OTTHUMP00000236989 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | |
| PMFBP1-011 | OTTHUMT00000396523.1 | 955 | 116aa | OTTHUMP00000237016 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | |
| PMFBP1-009 | OTTHUMT00000396526.2 | 559 | 156aa | OTTHUMP00000237019 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PMFBP1-008 | OTTHUMT00000396527.2 | 556 | 110aa | OTTHUMP00000237020 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PMFBP1-010 | OTTHUMT00000396529.2 | 458 | 68aa | OTTHUMP00000237021 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PMFBP1-006 | OTTHUMT00000396530.2 | 407 | 47aa | OTTHUMP00000237022 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PMFBP1-002 | OTTHUMT00000396484.1 | 2797 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | |
| PMFBP1-004 | OTTHUMT00000396524.1 | 3671 | 101aa | OTTHUMP00000237017 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| PMFBP1-005 | OTTHUMT00000396525.1 | 2038 | 502aa | OTTHUMP00000237018 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PMFBP1-007 | OTTHUMT00000396528.1 | 544 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - |
