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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
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- Orthologues
- Alt. alleles
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Gene: PTPN21 OTTHUMG00000170766

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Description

protein tyrosine phosphatase, non-receptor type 21

Synonyms

PTPD1, PTPRL10

Location

Chromosome 14: 88,465,781-88,554,733 reverse strand.

VEGA68:CM000676.2

About this gene

This gene has 8 transcripts (splice variants), 26 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	CCDS	UniProt	Flags
PTPN21-001	OTTHUMT00000410303.1	6166	1174aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9884	Q16825
PTPN21-005	OTTHUMT00000410309.1	1014	195aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3V3S6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PTPN21-008	OTTHUMT00000410304.1	704	128aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YJ59	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PTPN21-003	OTTHUMT00000410305.1	3943	61aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3V1Q9
PTPN21-002	OTTHUMT00000410308.1	1571	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PTPN21-007	OTTHUMT00000410310.1	822	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PTPN21-004	OTTHUMT00000410306.1	4008	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PTPN21-006	OTTHUMT00000410307.1	576	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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