Description
leucine rich repeat containing 49
Synonyms
FLJ20156
Location
Chromosome 15: 70,853,239-71,053,657 forward strand.
VEGA68:CM000677.2
About this gene
This gene has 28 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LRRC49-001 | OTTHUMT00000417202.2 | 6605 | 676aa | OTTHUMP00000247792 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS61694 | - | |
| LRRC49-006 | OTTHUMT00000417209.3 | 2784 | 686aa | OTTHUMP00000247799 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32282 | Q8IUZ0 | |
| LRRC49-005 | OTTHUMT00000417208.1 | 2586 | 691aa | OTTHUMP00000247798 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58376 | - | |
| LRRC49-008 | OTTHUMT00000417216.2 | 2531 | 392aa | OTTHUMP00000247804 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| LRRC49-011 | OTTHUMT00000417223.1 | 1898 | 374aa | OTTHUMP00000247808 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| LRRC49-016 | OTTHUMT00000417225.2 | 744 | 115aa | OTTHUMP00000247810 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LRRC49-002 | OTTHUMT00000417204.2 | 602 | 30aa | OTTHUMP00000247794 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LRRC49-018 | OTTHUMT00000417224.2 | 585 | 96aa | OTTHUMP00000247809 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LRRC49-023 | OTTHUMT00000417215.3 | 584 | 21aa | OTTHUMP00000256037 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LRRC49-015 | OTTHUMT00000417222.2 | 580 | 78aa | OTTHUMP00000247807 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LRRC49-017 | OTTHUMT00000417226.2 | 570 | 91aa | OTTHUMP00000247811 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LRRC49-014 | OTTHUMT00000417212.2 | 398 | 117aa | OTTHUMP00000247802 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LRRC49-004 | OTTHUMT00000417205.1 | 3061 | 74aa | OTTHUMP00000247795 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LRRC49-009 | OTTHUMT00000417207.3 | 2721 | 67aa | OTTHUMP00000247797 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LRRC49-012 | OTTHUMT00000417206.1 | 938 | 62aa | OTTHUMP00000247796 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LRRC49-013 | OTTHUMT00000417214.1 | 559 | 62aa | OTTHUMP00000247803 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LRRC49-022 | OTTHUMT00000417211.1 | 546 | 62aa | OTTHUMP00000247801 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LRRC49-024 | OTTHUMT00000417210.1 | 527 | 67aa | OTTHUMP00000247800 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LRRC49-007 | OTTHUMT00000417218.1 | 2294 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LRRC49-028 | OTTHUMT00000417229.1 | 738 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LRRC49-027 | OTTHUMT00000417228.1 | 727 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LRRC49-025 | OTTHUMT00000417219.1 | 636 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LRRC49-019 | OTTHUMT00000417220.1 | 566 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LRRC49-003 | OTTHUMT00000417203.2 | 557 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LRRC49-010 | OTTHUMT00000417213.1 | 1443 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LRRC49-026 | OTTHUMT00000417221.1 | 1204 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LRRC49-020 | OTTHUMT00000417227.1 | 758 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LRRC49-021 | OTTHUMT00000417217.1 | 573 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
