Description
calpain 12
Location
Chromosome 19: 38,730,187-38,769,904 reverse strand.
VEGA68:CM000681.2
About this gene
This gene has 12 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CAPN12-001 | OTTHUMT00000462151.1 | 2762 | 719aa | OTTHUMP00000269488 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12519 | Q6ZSI9 | |
| CAPN12-002 | OTTHUMT00000462148.1 | 2381 | 570aa | OTTHUMP00000269487 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0R3D7 | |
| CAPN12-011 | OTTHUMT00000462147.1 | 896 | 105aa | OTTHUMP00000269486 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QZT6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CAPN12-006 | OTTHUMT00000462156.2 | 546 | 179aa | OTTHUMP00000269490 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QZ20 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN12-010 | OTTHUMT00000462152.1 | 488 | 104aa | OTTHUMP00000269489 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CAPN12-005 | OTTHUMT00000462146.1 | 1046 | 36aa | OTTHUMP00000269485 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CAPN12-007 | OTTHUMT00000462157.2 | 547 | 93aa | OTTHUMP00000269491 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | M0R0X4 | |
| CAPN12-012 | OTTHUMT00000462154.1 | 2552 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN12-003 | OTTHUMT00000462150.1 | 2198 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN12-004 | OTTHUMT00000462149.1 | 1118 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN12-008 | OTTHUMT00000462155.1 | 526 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN12-009 | OTTHUMT00000462153.1 | 519 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
