Description
EF-hand calcium binding domain 1
Location
Chromosome 8: 48,724,691-48,735,268 reverse strand.
About this transcript
This transcript has 5 exons and is annotated with 18 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000164203 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| EFCAB1-001 | OTTHUMT00000377778.1 | 2051 | 211aa | OTTHUMP00000226175 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6145 | Q9HAE3 | |
| EFCAB1-008 | OTTHUMT00000377781.2 | 648 | 159aa | OTTHUMP00000226177 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47853 | A0A024R7U7 | |
| EFCAB1-006 | OTTHUMT00000377780.3 | 639 | 129aa | OTTHUMP00000226176 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YC53 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| EFCAB1-010 | OTTHUMT00000377831.1 | 613 | 78aa | OTTHUMP00000226207 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YBJ9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| EFCAB1-003 | OTTHUMT00000377779.1 | 1870 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| EFCAB1-007 | OTTHUMT00000377777.1 | 920 | 54aa | OTTHUMP00000226174 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H9KVD9 | |
| EFCAB1-002 | OTTHUMT00000377776.2 | 1661 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| EFCAB1-009 | OTTHUMT00000377783.2 | 581 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| EFCAB1-004 | OTTHUMT00000377782.1 | 576 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
