Transcript: HELLS-001 OTTHUMT00000049475.1

Description

helicase, lymphoid-specific

Location

About this transcript

This transcript has 22 exons and is annotated with 20 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HELLS-001	OTTHUMT00000049475.1	3099	838aa	OTTHUMP00000020127	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7434	Q9NRZ9
HELLS-002	OTTHUMT00000049476.1	4987	310aa	OTTHUMP00000020128	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
HELLS-003	OTTHUMT00000049477.2	711	192aa	OTTHUMP00000020129	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HELLS-004	OTTHUMT00000049478.1	778	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HELLS-005	OTTHUMT00000049479.1	2724	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HELLS-007	OTTHUMT00000049481.1	676	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HELLS-006	OTTHUMT00000049480.1	321	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 22 Transcript length: 3,099 bps Translation length: 838 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7434

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 28/05/2003)

Alternative symbols

RP11-119K6.1-001

Remarks

helicase, lymphoid-specific (LSH, PASG, SMARCA6, FLJ10339)

Other assemblies

This transcript maps to 94,545,817-94,602,099 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000348459

Curation Method

Manual annotation from Havana