Transcript: CD40-006 OTTHUMT00000080381.3

Description

CD40 molecule, TNF receptor superfamily member 5

Location

About this transcript

This transcript has 8 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CD40-001	OTTHUMT00000080376.1	1729	277aa	OTTHUMP00000031699	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13393	P25942
CD40-002	OTTHUMT00000080377.1	1623	203aa	OTTHUMP00000031700	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13394	-
CD40-006	OTTHUMT00000080381.3	822	159aa	OTTHUMP00000031701	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YE23	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CD40-003	OTTHUMT00000080378.1	1733	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CD40-005	OTTHUMT00000080380.1	771	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CD40-004	OTTHUMT00000080379.1	710	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 8 Transcript length: 822 bps Translation length: 159 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 11/11/2003)

Alternative symbols

RP4-599F21.1-006

Remarks

tumor necrosis factor receptor superfamily, member 5

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 46,118,348-46,129,126 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000466205

Curation Method

Manual annotation from Havana