Transcript: SLC40A1-001 OTTHUMT00000255916.2

Description

solute carrier family 40 (iron-regulated transporter), member 1

Location

Chromosome 2: 189,560,579-189,580,887 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 26 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000132662 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SLC40A1-001	OTTHUMT00000255916.2	3442	571aa	OTTHUMP00000163497	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2299	Q9NP59
SLC40A1-002	OTTHUMT00000335038.3	824	200aa	OTTHUMP00000207310	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E7ES28	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC40A1-004	OTTHUMT00000335040.3	592	55aa	OTTHUMP00000207312	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E7EQF8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC40A1-003	OTTHUMT00000335039.3	299	25aa	OTTHUMP00000207311	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC40A1-005	OTTHUMT00000335041.2	209	25aa	OTTHUMP00000207313	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC40A1-008	OTTHUMT00000335044.1	712	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLC40A1-006	OTTHUMT00000335042.1	993	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 3,442 bps Translation length: 571 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2299

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 10/01/2006)

Alternative symbols

AC013439.2-001

Other assemblies

This transcript maps to 189,560,579-189,580,887 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000261024

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SLC40A1-001 OTTHUMT00000255916.2

Summary

Transcript-based displays