Description
ceroid-lipofuscinosis, neuronal 6, late infantile, variant
Location
Chromosome 15: 68,206,992-68,229,743 reverse strand.
About this transcript
This transcript has 7 exons and is annotated with 10 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000133286 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CLN6-001 | OTTHUMT00000257066.2 | 2243 | 311aa | OTTHUMP00000164387 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10227 | A0A024R601 | |
| CLN6-004 | OTTHUMT00000419725.1 | 1343 | 343aa | OTTHUMP00000248987 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| CLN6-008 | OTTHUMT00000419722.2 | 1075 | 158aa | OTTHUMP00000248984 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BTY4 | |
| CLN6-005 | OTTHUMT00000419724.1 | 981 | 248aa | OTTHUMP00000248986 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BUT1 | |
| CLN6-006 | OTTHUMT00000419726.1 | 900 | 213aa | OTTHUMP00000248988 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BUV4 | |
| CLN6-012 | OTTHUMT00000489768.1 | 874 | 251aa | OTTHUMP00000282262 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CLN6-021 | OTTHUMT00000489779.1 | 765 | 215aa | OTTHUMP00000282268 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GUD2 | |
| CLN6-013 | OTTHUMT00000489771.1 | 442 | 103aa | OTTHUMP00000282264 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| CLN6-007 | OTTHUMT00000419727.4 | 2323 | 171aa | OTTHUMP00000282263 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0S2Z5D0 | |
| CLN6-009 | OTTHUMT00000489765.1 | 1204 | 86aa | OTTHUMP00000282259 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CLN6-019 | OTTHUMT00000489778.1 | 1181 | 61aa | OTTHUMP00000282267 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CLN6-016 | OTTHUMT00000489766.2 | 1053 | 108aa | OTTHUMP00000282260 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CLN6-003 | OTTHUMT00000419723.1 | 945 | 105aa | OTTHUMP00000248985 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CLN6-014 | OTTHUMT00000489767.1 | 868 | 76aa | OTTHUMP00000282261 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CLN6-020 | OTTHUMT00000489781.2 | 717 | 76aa | OTTHUMP00000282269 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CLN6-010 | OTTHUMT00000489774.1 | 655 | 67aa | OTTHUMP00000282265 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CLN6-025 | OTTHUMT00000489800.1 | 652 | 61aa | OTTHUMP00000282292 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CLN6-024 | OTTHUMT00000489780.1 | 576 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CLN6-015 | OTTHUMT00000489770.2 | 557 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CLN6-023 | OTTHUMT00000489777.1 | 3335 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CLN6-017 | OTTHUMT00000489769.2 | 2005 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CLN6-002 | OTTHUMT00000419728.1 | 1762 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CLN6-022 | OTTHUMT00000489782.1 | 1441 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CLN6-011 | OTTHUMT00000489772.1 | 894 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CLN6-018 | OTTHUMT00000489773.1 | 557 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
