Transcript: COL22A1-001 OTTHUMT00000315905.2

Description

collagen, type XXII, alpha 1

Location

About this transcript

This transcript has 65 exons and is annotated with 51 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COL22A1-001	OTTHUMT00000315905.2	6346	1626aa	OTTHUMP00000196069	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6376	Q8NFW1
COL22A1-007	OTTHUMT00000377691.1	554	65aa	OTTHUMP00000226134	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COL22A1-005	OTTHUMT00000377690.1	4301	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
COL22A1-003	OTTHUMT00000315907.1	3584	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COL22A1-004	OTTHUMT00000315908.1	697	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COL22A1-006	OTTHUMT00000377692.1	661	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COL22A1-002	OTTHUMT00000315906.1	572	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 65 Transcript length: 6,346 bps Translation length: 1,626 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6376

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 18/01/2007)

Alternative symbols

AC115720.1-001

Other assemblies

This transcript maps to 138,588,235-138,913,993 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000303045

Curation Method

Manual annotation from Havana