Transcript: SBF1-003 OTTHUMT00000316821.2

Description

SET binding factor 1

Location

Chromosome 22: 50,446,806-50,474,942 reverse strand.

About this transcript

This transcript has 40 exons and is annotated with 38 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000150204 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SBF1-001	OTTHUMT00000316819.2	8008	1893aa	OTTHUMP00000196597	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14091	A0A024R4Z9
SBF1-003	OTTHUMT00000316821.2	6045	1868aa	OTTHUMP00000196599	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G5E933
SBF1-005	OTTHUMT00000316823.1	1578	415aa	OTTHUMP00000196600	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y5W8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SBF1-007	OTTHUMT00000316825.1	399	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SBF1-004	OTTHUMT00000316822.1	2139	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SBF1-009	OTTHUMT00000352329.1	947	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SBF1-008	OTTHUMT00000316826.1	811	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SBF1-006	OTTHUMT00000316824.1	446	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 40 Transcript length: 6,045 bps Translation length: 1,868 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 03/04/2007)

Alternative symbols

RP4-579N16.7-003

Other assemblies

This transcript maps to 50,446,806-50,474,942 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000348911

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SBF1-003 OTTHUMT00000316821.2

Summary

Transcript-based displays