Transcript: CCDC39-001 OTTHUMT00000349783.3

Description

coiled-coil domain containing 39

Location

Chromosome 3: 180,614,588-180,679,500 reverse strand.

About this transcript

This transcript has 20 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000157857 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CCDC39-001	OTTHUMT00000349783.3	3279	941aa	OTTHUMP00000212526	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46964	Q9UFE4
CCDC39-003	OTTHUMT00000349889.3	783	97aa	OTTHUMP00000212554	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9IZC4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CCDC39-007	OTTHUMT00000349893.2	534	67aa	OTTHUMP00000212844	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CCDC39-006	OTTHUMT00000349892.2	487	102aa	OTTHUMP00000212843	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C4X6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CCDC39-002	OTTHUMT00000349784.1	4451	671aa	OTTHUMP00000212527	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WBW2
CCDC39-004	OTTHUMT00000349890.1	2874	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CCDC39-005	OTTHUMT00000349891.1	1047	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 20 Transcript length: 3,279 bps Translation length: 941 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS46964

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 16/03/2009)

Alternative symbols

RP11-496B10.4-001

Remarks

NP_852091

Other assemblies

This transcript maps to 180,614,588-180,679,500 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000442201

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: CCDC39-001 OTTHUMT00000349783.3

Summary

Transcript-based displays