Transcript: SLC9A9-001 OTTHUMT00000354994.1

Description

solute carrier family 9 (sodium/hydrogen exchanger), member 9

Location

About this transcript

This transcript has 16 exons and is annotated with 28 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SLC9A9-001	OTTHUMT00000354994.1	3627	645aa	OTTHUMP00000215083	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33872	Q8IVB4
SLC9A9-004	OTTHUMT00000354997.2	579	147aa	OTTHUMP00000215085	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9IZP1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC9A9-002	OTTHUMT00000354995.2	1620	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SLC9A9-007	OTTHUMT00000370391.1	591	61aa	OTTHUMP00000222657	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WF83
SLC9A9-003	OTTHUMT00000354996.1	712	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLC9A9-005	OTTHUMT00000354998.2	569	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 16 Transcript length: 3,627 bps Translation length: 645 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33872

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 28/05/2009)

Alternative symbols

RP13-635I23.1-001

Other assemblies

This transcript maps to 143,265,222-143,848,531 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000316549

Curation Method

Manual annotation from Havana