Transcript: STAG1-001 OTTHUMT00000357366.2

Description

stromal antigen 1

Location

Chromosome 3: 136,336,233-136,752,368 reverse strand.

About this transcript

This transcript has 34 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000159798 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
STAG1-001	OTTHUMT00000357366.2	6055	1258aa	OTTHUMP00000216529	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3090	Q8WVM7
STAG1-002	OTTHUMT00000357403.1	5951	1221aa	OTTHUMP00000216539	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
STAG1-005	OTTHUMT00000357406.1	1304	232aa	OTTHUMP00000216542	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JJQ0
STAG1-006	OTTHUMT00000357407.2	570	190aa	OTTHUMP00000216543	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
STAG1-003	OTTHUMT00000357404.1	5206	101aa	OTTHUMP00000216540	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
STAG1-004	OTTHUMT00000357405.1	2914	161aa	OTTHUMP00000216541	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
STAG1-008	OTTHUMT00000357409.1	1227	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
STAG1-007	OTTHUMT00000357408.1	746	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 34 Transcript length: 6,055 bps Translation length: 1,258 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3090

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 29/06/2009)

Alternative symbols

RP11-181C6.2-001

Other assemblies

This transcript maps to 136,336,233-136,752,368 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000383202

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: STAG1-001 OTTHUMT00000357366.2

Summary

Transcript-based displays