Transcript: H2AFJ-002 OTTHUMT00000400849.2

Description

H2A histone family, member J

Location

About this transcript

This transcript has 2 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
H2AFJ-001	OTTHUMT00000400845.1	644	129aa	OTTHUMP00000239324	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31752	Q9BTM1
H2AFJ-004	OTTHUMT00000400847.1	2210	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
H2AFJ-003	OTTHUMT00000400846.1	1260	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
H2AFJ-005	OTTHUMT00000400848.1	785	129aa	OTTHUMP00000239325	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS31752	Q9BTM1
H2AFJ-002	OTTHUMT00000400849.2	3107	92aa	OTTHUMP00000239326	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YFX9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 2 Transcript length: 3,107 bps Translation length: 92 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 16/11/2010)

Alternative symbols

RP11-174G6.3-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 14,774,582-14,778,002 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000501744

Curation Method

Manual annotation from Havana