Transcript: PTPRB-001 OTTHUMT00000404435.2

Description

protein tyrosine phosphatase, receptor type, B

Location

Chromosome 12: 70,515,866-70,637,440 reverse strand.

About this transcript

This transcript has 34 exons and is annotated with 98 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000169499 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PTPRB-001	OTTHUMT00000404435.2	12316	2215aa	OTTHUMP00000241328	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44943	-
PTPRB-003	OTTHUMT00000404436.1	6583	2127aa	OTTHUMP00000241329	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81713	F8VU56
PTPRB-007	OTTHUMT00000404439.1	6110	1997aa	OTTHUMP00000241332	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44944	P23467
PTPRB-008	OTTHUMT00000404437.1	5839	1907aa	OTTHUMP00000241330	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55846	-
PTPRB-009	OTTHUMT00000404438.1	5839	1907aa	OTTHUMP00000241331	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55845	-
PTPRB-004	OTTHUMT00000404441.1	5291	1583aa	OTTHUMP00000241333	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
PTPRB-006	OTTHUMT00000404442.2	4237	1407aa	OTTHUMP00000241334	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PTPRB-010	OTTHUMT00000404445.1	639	103aa	OTTHUMP00000241335	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PTPRB-005	OTTHUMT00000404443.1	2661	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PTPRB-002	OTTHUMT00000404444.1	2373	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PTPRB-011	OTTHUMT00000404440.1	552	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 34 Transcript length: 12,316 bps Translation length: 2,215 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS44943

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 11/01/2011)

Alternative symbols

RP11-588H23.4-001

Other assemblies

This transcript maps to 70,515,866-70,637,440 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000334414

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PTPRB-001 OTTHUMT00000404435.2

Summary

Transcript-based displays