Transcript: ATG101-001 OTTHUMT00000405063.1

Description

autophagy related 101

Location

Chromosome 12: 52,069,971-52,077,494 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000169611 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ATG101-001	OTTHUMT00000405063.1	1439	218aa	OTTHUMP00000241687	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8820	Q9BSB4
ATG101-006	OTTHUMT00000405066.2	846	190aa	OTTHUMP00000241688	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8VQD9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ATG101-005	OTTHUMT00000405065.3	671	84aa	OTTHUMP00000249737	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BMZ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ATG101-007	OTTHUMT00000405068.2	658	141aa	OTTHUMP00000241689	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8VVA0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ATG101-003	OTTHUMT00000405062.1	759	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ATG101-002	OTTHUMT00000405067.1	1312	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ATG101-004	OTTHUMT00000405064.1	837	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 1,439 bps Translation length: 218 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8820

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 05/01/2016 (Created on 17/01/2011)

Alternative symbols

RP11-1100L3.6-001

Other assemblies

This transcript maps to 52,069,971-52,077,494 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000336854

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ATG101-001 OTTHUMT00000405063.1

Summary

Transcript-based displays