Transcript: SENP1-002 OTTHUMT00000406469.2

Description

SUMO1/sentrin specific peptidase 1

Location

Chromosome 12: 48,042,974-48,105,808 reverse strand.

About this transcript

This transcript has 18 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000169896 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SENP1-002	OTTHUMT00000406469.2	4679	644aa	OTTHUMP00000242414	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44868	Q9P0U3
SENP1-004	OTTHUMT00000406471.1	2260	644aa	OTTHUMP00000242416	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44868	Q9P0U3
SENP1-003	OTTHUMT00000406470.2	1932	643aa	OTTHUMP00000242415	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9P0U3
SENP1-006	OTTHUMT00000406475.2	562	142aa	OTTHUMP00000242417	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8VRZ8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SENP1-001	OTTHUMT00000406468.1	4967	130aa	OTTHUMP00000242413	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SENP1-009	OTTHUMT00000406473.1	965	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SENP1-010	OTTHUMT00000406474.1	866	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SENP1-007	OTTHUMT00000406476.1	691	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SENP1-005	OTTHUMT00000406477.1	475	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SENP1-008	OTTHUMT00000406472.1	452	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 4,679 bps Translation length: 644 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS44868

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 27/01/2011)

Alternative symbols

RP1-228P16.6-002

Other assemblies

This transcript maps to 48,042,974-48,105,808 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000448372

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: SENP1-002 OTTHUMT00000406469.2

Summary

Transcript-based displays