Transcript: CD320-002 OTTHUMT00000461365.1

Description

CD320 molecule

Location

Chromosome 19: 8,302,127-8,308,350 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000182457 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CD320-001	OTTHUMT00000461366.1	1250	282aa	OTTHUMP00000269358	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12198	Q9NPF0
CD320-002	OTTHUMT00000461365.1	1119	240aa	OTTHUMP00000269357	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54210	-
CD320-004	OTTHUMT00000461367.1	2433	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CD320-003	OTTHUMT00000461364.1	1729	81aa	OTTHUMP00000269356	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CD320-006	OTTHUMT00000462543.1	861	88aa	OTTHUMP00000269602	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CD320-005	OTTHUMT00000461368.1	492	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CD320-007	OTTHUMT00000462544.1	577	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 1,119 bps Translation length: 240 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54210

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 14/06/2012)

Alternative symbols

CTD-2550O8.4-002

Remarks

NP_001159367.1

Other assemblies

This transcript maps to 8,302,127-8,308,350 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000537716

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CD320-002 OTTHUMT00000461365.1

Summary

Transcript-based displays