Transcript: SLC12A7-010 OTTHUMT00000488003.1

Description

solute carrier family 12 (potassium/chloride transporters), member 7

Location

Chromosome 5: 1,052,186-1,093,575 reverse strand.

About this transcript

This transcript has 23 exons and is annotated with 34 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000161931 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SLC12A7-001	OTTHUMT00000366446.3	5280	1083aa	OTTHUMP00000220873	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34129	Q9Y666
SLC12A7-010	OTTHUMT00000488003.1	3142	989aa	OTTHUMP00000281147	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RR18	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SLC12A7-007	OTTHUMT00000366450.4	1066	355aa	OTTHUMP00000224511	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JQE3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SLC12A7-003	OTTHUMT00000366448.3	2671	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SLC12A7-002	OTTHUMT00000366447.1	1055	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SLC12A7-006	OTTHUMT00000366449.2	680	63aa	OTTHUMP00000281148	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RR10	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SLC12A7-008	OTTHUMT00000366451.1	586	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SLC12A7-009	OTTHUMT00000374692.2	421	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 23 Transcript length: 3,142 bps Translation length: 989 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 05/03/2015 (Created on 05/03/2015)

Alternative symbols

RP11-43F13.2-010

Annotation Attributes

not organism-supported [Definitions]

Remarks

non canonical conserved

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 1,052,186-1,093,575 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000634447

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SLC12A7-010 OTTHUMT00000488003.1

Summary

Transcript-based displays