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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
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Gene: Taf6 OTTMUSG00000022698

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Description

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Location

Chromosome 5: 138,178,617-138,187,451 reverse strand.

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	CCDS	UniProt	Flags
Taf6-001	OTTMUST00000054447.1	2308	678aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19795	Q62311
Taf6-002	OTTMUST00000054448.1	2304	678aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19795	Q62311
Taf6-005	OTTMUST00000054451.1	2093	636aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z0T0
Taf6-003	OTTMUST00000054449.2	968	214aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z5H6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Taf6-007	OTTMUST00000054453.2	357	55aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z4X5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Taf6-004	OTTMUST00000054450.2	2619	114aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	S4R1R2
Taf6-008	OTTMUST00000135511.1	1139	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Taf6-006	OTTMUST00000054452.1	1220	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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