This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
Sequence
Protein Information
- Protein summary
- Domains & features
External References
- General identifiers
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Transcript: Shank1-001 OTTMUST00000039587.3

.

Description

SH3/ankyrin domain gene 1

Location

Chromosome 7: 44,310,253-44,360,572 forward strand.

About this transcript

This transcript has 25 exons and is annotated with 74 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000016443 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Shank1-001	OTTMUST00000039587.3	9826	2167aa	OTTMUSP00000017680	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52229	D3YZU1
Shank1-003	OTTMUST00000039589.1	6649	2159aa	OTTMUSP00000017682	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YZU4
Shank1-002	OTTMUST00000039588.2	6477	2158aa	OTTMUSP00000017681	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YZU5
Shank1-005	OTTMUST00000039591.1	608	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Shank1-004	OTTMUST00000039590.1	987	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Shank1-007	OTTMUST00000039593.1	784	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Protein summary

.

Protein domains for OTTMUSP00000017680.1

.

Transcript-based displays