Transcript: Irf8-001 OTTMUST00000085321.1

Description

interferon regulatory factor 8

Location

Chromosome 8: 120,736,358-120,756,694 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000033858 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Irf8-001	OTTMUST00000085321.1	2847	424aa	OTTMUSP00000046087	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22721	Q544J7
Irf8-003	OTTMUST00000085323.2	2270	424aa	OTTMUSP00000046088	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22721	Q544J7
Irf8-004	OTTMUST00000085324.3	597	131aa	OTTMUSP00000046089	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7C1A3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Irf8-005	OTTMUST00000085325.2	480	151aa	OTTMUSP00000046090	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CZE4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Irf8-007	OTTMUST00000085327.1	596	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Irf8-002	OTTMUST00000085322.1	3469	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Irf8-006	OTTMUST00000085326.1	764	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 2,847 bps Translation length: 424 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22721

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 17/11/2008)

Alternative symbols

AC114819.1-001

Remarks

9030603A05Rik

9830117K07Rik

F630102I12Rik

F830023G07Rik

F830204O20Rik

F830206A06Rik

F830208C16Rik

F830305K20Rik

I420032H05Rik

I530023J24Rik

I830002M18Rik

I830005N03Rik

I830028B18Rik

I830030L13Rik

I830074O06Rik

I830089N18Rik

I830120J15Rik

I830125N07Rik

I830154D07Rik

NP_032346

Other assemblies

This transcript maps to 120,736,358-120,756,694 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000047737

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Irf8-001 OTTMUST00000085321.1

Summary

Transcript-based displays