Transcript: H2afz-005 OTTMUST00000098340.1

Description

H2A histone family, member Z

Location

Chromosome 3: 137,864,573-137,866,818 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000022256 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
H2afz-001	OTTMUST00000052970.2	1069	128aa	OTTMUSP00000025168	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38647	P0C0S6
H2afz-005	OTTMUST00000098340.1	810	105aa	OTTMUSP00000055248	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q3UA95
H2afz-007	OTTMUST00000098343.1	437	87aa	OTTMUSP00000055249	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3UWL7
H2afz-004	OTTMUST00000098341.1	849	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
H2afz-008	OTTMUST00000098344.1	349	54aa	OTTMUSP00000055250	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3UX40
H2afz-006	OTTMUST00000098342.1	361	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
H2afz-003	OTTMUST00000052972.1	882	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
H2afz-002	OTTMUST00000052971.2	870	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 810 bps Translation length: 105 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 09/05/2011)

Alternative symbols

AC125154.1-005

Remarks

I830030H04Rik

Other assemblies

This transcript maps to 137,864,573-137,866,818 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000174561

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: H2afz-005 OTTMUST00000098340.1

Summary

Transcript-based displays