Transcript: Sf3b1-001 OTTMUST00000121704.1

Description

splicing factor 3b, subunit 1

Location

Chromosome 1: 54,985,169-55,027,481 reverse strand.

About this transcript

This transcript has 25 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000046964 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Sf3b1-001	OTTMUST00000121704.1	6195	1304aa	OTTMUSP00000066983	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35567	G5E866
Sf3b1-002	OTTMUST00000121709.1	600	144aa	OTTMUSP00000066984	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Sf3b1-007	OTTMUST00000121710.1	804	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sf3b1-005	OTTMUST00000121706.1	3589	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sf3b1-003	OTTMUST00000121707.1	3403	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sf3b1-004	OTTMUST00000121705.1	3350	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sf3b1-008	OTTMUST00000121711.1	711	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sf3b1-006	OTTMUST00000121708.1	628	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 25 Transcript length: 6,195 bps Translation length: 1,304 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35567

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/01/2014 (Created on 10/01/2014)

Alternative symbols

RP23-68O7.3-001

Other assemblies

This transcript maps to 54,985,169-55,027,481 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000027127

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Sf3b1-001 OTTMUST00000121704.1

Summary

Transcript-based displays