Description
nephronophthisis 4
Synonyms
POC10, SLSN4, KIAA0673
Location
Chromosome 1: 5,862,811-5,992,473 reverse strand.
VEGA68:CM000663.2
About this gene
This gene has 10 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| NPHP4-001 | OTTHUMT00000001715.2 | 4994 | 1426aa | OTTHUMP00000000745 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44052 | O75161 | |
| NPHP4-002 | OTTHUMT00000001716.4 | 5548 | 911aa | OTTHUMP00000221426 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NPHP4-011 | OTTHUMT00000367612.1 | 4213 | 262aa | OTTHUMP00000221425 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RA06 | |
| NPHP4-005 | OTTHUMT00000001719.3 | 1192 | 138aa | OTTHUMP00000221427 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YA08 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| NPHP4-009 | OTTHUMT00000099309.2 | 4467 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NPHP4-004 | OTTHUMT00000001718.2 | 4370 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NPHP4-010 | OTTHUMT00000099310.1 | 3967 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NPHP4-003 | OTTHUMT00000001717.1 | 3156 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NPHP4-008 | OTTHUMT00000002105.1 | 781 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NPHP4-012 | OTTHUMT00000367613.1 | 570 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
