Description
tRNA isopentenyltransferase 1
Synonyms
FLJ20061, IPT
Location
Chromosome 1: 39,841,051-39,883,511 reverse strand.
VEGA68:CM000663.2
About this gene
This gene has 13 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TRIT1-001 | OTTHUMT00000025627.2 | 2112 | 467aa | OTTHUMP00000010832 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS30681 | Q9H3H1 | |
| TRIT1-002 | OTTHUMT00000025628.2 | 2034 | 441aa | OTTHUMP00000010833 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81303 | - | |
| TRIT1-003 | OTTHUMT00000025629.2 | 1851 | 385aa | OTTHUMP00000010834 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81302 | - | |
| TRIT1-004 | OTTHUMT00000025630.2 | 2000 | 349aa | OTTHUMP00000272535 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | S4R2Z0 | |
| TRIT1-005 | OTTHUMT00000025631.2 | 1156 | 63aa | OTTHUMP00000272536 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | S4R3F4 | |
| TRIT1-009 | OTTHUMT00000025635.2 | 983 | 140aa | OTTHUMP00000272537 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | S4R2X1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TRIT1-006 | OTTHUMT00000025632.2 | 861 | 143aa | OTTHUMP00000272538 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B4DK89 | |
| TRIT1-007 | OTTHUMT00000025633.2 | 850 | 81aa | OTTHUMP00000272539 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | S4R3C5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TRIT1-008 | OTTHUMT00000025634.2 | 773 | 170aa | OTTHUMP00000272540 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | S4R3U8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TRIT1-013 | OTTHUMT00000025639.1 | 738 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TRIT1-012 | OTTHUMT00000025638.1 | 499 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TRIT1-010 | OTTHUMT00000025636.2 | 550 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TRIT1-011 | OTTHUMT00000025637.1 | 464 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
