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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: SETX OTTHUMG00000020834

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Description

senataxin

Synonyms

KIAA0625, AOA2

Location

Chromosome 9: 132,261,356-132,354,985 reverse strand.

VEGA68:CM000671.2

About this gene

This gene has 6 transcripts (splice variants), 5 orthologues and 4 paralogues.

Transcripts

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Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SETX-001	OTTHUMT00000054774.3	11100	2677aa	OTTHUMP00000022428	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6947	Q7Z333
SETX-003	OTTHUMT00000054775.2	5730	948aa	OTTHUMP00000022429	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	X6RI79	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SETX-002	OTTHUMT00000254585.2	2606	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SETX-004	OTTHUMT00000054776.2	4067	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SETX-006	OTTHUMT00000054778.1	719	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SETX-005	OTTHUMT00000054777.2	631	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Summary

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Gene-based displays