Description
vacuolar protein sorting 41 homolog (S. cerevisiae)
Synonyms
HVSP41
Location
Chromosome 7: 38,722,963-38,932,394 reverse strand.
VEGA68:CM000669.2
About this gene
This gene has 14 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| VPS41-001 | OTTHUMT00000226986.3 | 5903 | 854aa | OTTHUMP00000135322 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5457 | P49754 | |
| VPS41-002 | OTTHUMT00000226987.2 | 3181 | 829aa | OTTHUMP00000135323 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5458 | Q9H348 | |
| VPS41-012 | OTTHUMT00000313604.2 | 575 | 156aa | OTTHUMP00000194820 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| VPS41-003 | OTTHUMT00000059950.2 | 548 | 177aa | OTTHUMP00000025247 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | P49754 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| VPS41-014 | OTTHUMT00000339357.3 | 532 | 104aa | OTTHUMP00000207686 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| VPS41-013 | OTTHUMT00000339356.2 | 465 | 73aa | OTTHUMP00000207685 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| VPS41-006 | OTTHUMT00000313598.1 | 354 | 109aa | OTTHUMP00000194819 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C0K2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| VPS41-010 | OTTHUMT00000313602.2 | 769 | 209aa | OTTHUMP00000207242 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| VPS41-004 | OTTHUMT00000313596.2 | 711 | 150aa | OTTHUMP00000207241 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H7BZX6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| VPS41-011 | OTTHUMT00000313603.1 | 591 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| VPS41-009 | OTTHUMT00000313601.1 | 571 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| VPS41-007 | OTTHUMT00000313599.1 | 951 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| VPS41-005 | OTTHUMT00000313597.1 | 496 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| VPS41-008 | OTTHUMT00000313600.1 | 347 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
