Description
rogdi homolog (Drosophila)
Synonyms
FLJ22386
Location
Chromosome 16: 4,796,968-4,802,950 reverse strand.
VEGA68:CM000678.2
About this gene
This gene has 16 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ROGDI-001 | OTTHUMT00000251643.3 | 1735 | 287aa | OTTHUMP00000159854 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10523 | Q9GZN7 | |
| ROGDI-015 | OTTHUMT00000460402.2 | 811 | 253aa | OTTHUMP00000268861 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ROGDI-009 | OTTHUMT00000439093.3 | 651 | 217aa | OTTHUMP00000268860 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ROGDI-014 | OTTHUMT00000460403.2 | 570 | 171aa | OTTHUMP00000268862 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ROGDI-016 | OTTHUMT00000460404.1 | 457 | 121aa | OTTHUMP00000268863 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ROGDI-010 | OTTHUMT00000439243.2 | 371 | 73aa | OTTHUMP00000268859 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ROGDI-005 | OTTHUMT00000434594.2 | 1530 | 119aa | OTTHUMP00000268858 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ROGDI-003 | OTTHUMT00000434596.1 | 1394 | 230aa | OTTHUMP00000255522 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ROGDI-002 | OTTHUMT00000434563.2 | 1362 | 68aa | OTTHUMP00000255521 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ROGDI-008 | OTTHUMT00000439094.1 | 893 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ROGDI-006 | OTTHUMT00000434595.1 | 2684 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ROGDI-007 | OTTHUMT00000439095.2 | 983 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ROGDI-004 | OTTHUMT00000434597.1 | 968 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ROGDI-013 | OTTHUMT00000460405.1 | 728 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ROGDI-011 | OTTHUMT00000439468.1 | 713 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ROGDI-012 | OTTHUMT00000460406.1 | 537 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
