Description
protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
Synonyms
PTPMEG
Location
Chromosome 2: 119,759,631-119,983,818 forward strand.
VEGA68:CM000664.2
About this gene
This gene has 12 transcripts (splice variants), 23 orthologues and 22 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PTPN4-001 | OTTHUMT00000254233.2 | 10300 | 926aa | OTTHUMP00000162133 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2129 | A0A024RAE8 | |
| PTPN4-008 | OTTHUMT00000332678.2 | 671 | 219aa | OTTHUMP00000204473 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KQD3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PTPN4-012 | OTTHUMT00000337271.4 | 662 | 161aa | OTTHUMP00000237282 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H020 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PTPN4-010 | OTTHUMT00000337187.1 | 630 | 197aa | OTTHUMP00000206739 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PTPN4-011 | OTTHUMT00000337188.3 | 568 | 75aa | OTTHUMP00000206780 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KQP5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PTPN4-002 | OTTHUMT00000332672.3 | 4154 | 135aa | OTTHUMP00000206740 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QT59 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PTPN4-005 | OTTHUMT00000332675.3 | 954 | 121aa | OTTHUMP00000204471 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QT89 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PTPN4-009 | OTTHUMT00000337186.1 | 623 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PTPN4-004 | OTTHUMT00000332674.2 | 590 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PTPN4-003 | OTTHUMT00000332673.2 | 577 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PTPN4-006 | OTTHUMT00000332676.1 | 575 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PTPN4-007 | OTTHUMT00000332677.2 | 476 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
