Description
anterior pharynx defective 1 homolog B (C. elegans)
Synonyms
PSFL, APH-1B, DKFZp564D0372
Location
Chromosome 15: 63,276,018-63,309,126 forward strand.
VEGA68:CM000677.2
About this gene
This gene has 10 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| APH1B-001 | OTTHUMT00000256337.1 | 4189 | 257aa | OTTHUMP00000163761 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10184 | Q8WW43 | |
| APH1B-002 | OTTHUMT00000417747.1 | 685 | 216aa | OTTHUMP00000248071 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45276 | - | |
| APH1B-006 | OTTHUMT00000417745.2 | 758 | 188aa | OTTHUMP00000248070 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YKZ9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| APH1B-005 | OTTHUMT00000417749.2 | 672 | 222aa | OTTHUMP00000248073 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YLT0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| APH1B-004 | OTTHUMT00000417750.2 | 1455 | 19aa | OTTHUMP00000248593 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| APH1B-003 | OTTHUMT00000417748.1 | 872 | 81aa | OTTHUMP00000248072 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q4R1J8 | |
| APH1B-008 | OTTHUMT00000417753.1 | 731 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| APH1B-010 | OTTHUMT00000417746.1 | 456 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| APH1B-009 | OTTHUMT00000417752.1 | 376 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| APH1B-007 | OTTHUMT00000417751.1 | 515 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
