Description
cadherin 16, KSP-cadherin
Location
Chromosome 16: 66,908,122-66,918,984 reverse strand.
VEGA68:CM000678.2
About this gene
This gene has 9 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CDH16-001 | OTTHUMT00000268839.2 | 2954 | 829aa | OTTHUMP00000174814 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10823 | O75309 | |
| CDH16-002 | OTTHUMT00000268840.1 | 2821 | 807aa | OTTHUMP00000174815 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56002 | - | |
| CDH16-006 | OTTHUMT00000421378.1 | 2694 | 790aa | OTTHUMP00000249751 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58471 | - | |
| CDH16-004 | OTTHUMT00000421376.1 | 2526 | 732aa | OTTHUMP00000249749 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58472 | - | |
| CDH16-007 | OTTHUMT00000421377.1 | 2604 | 749aa | OTTHUMP00000249750 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BSG2 | |
| CDH16-009 | OTTHUMT00000421381.3 | 715 | 238aa | OTTHUMP00000256744 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | I3L418 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| CDH16-008 | OTTHUMT00000421382.2 | 582 | 124aa | OTTHUMP00000259129 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QLA1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CDH16-003 | OTTHUMT00000421379.1 | 3539 | 175aa | OTTHUMP00000249752 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0B4J288 | |
| CDH16-005 | OTTHUMT00000421380.1 | 2026 | 248aa | OTTHUMP00000249753 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BSV3 |
