Description
enhancer of mRNA decapping 3 homolog (S. cerevisiae)
Synonyms
YJEFN2, hYjeF_N2-15q23, FLJ21128, LSM16
Location
Chromosome 15: 74,630,558-74,696,292 reverse strand.
VEGA68:CM000677.2
About this gene
This gene has 18 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| EDC3-001 | OTTHUMT00000286399.1 | 3763 | 508aa | OTTHUMP00000183472 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10267 | Q96F86 | |
| EDC3-003 | OTTHUMT00000421201.2 | 2093 | 508aa | OTTHUMP00000249656 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10267 | Q96F86 | |
| EDC3-004 | OTTHUMT00000421202.2 | 1825 | 508aa | OTTHUMP00000249657 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10267 | Q96F86 | |
| EDC3-016 | OTTHUMT00000421240.2 | 967 | 253aa | OTTHUMP00000249679 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EDC3-005 | OTTHUMT00000421204.1 | 761 | 213aa | OTTHUMP00000249659 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| EDC3-017 | OTTHUMT00000421242.2 | 711 | 131aa | OTTHUMP00000249681 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EDC3-009 | OTTHUMT00000421213.2 | 688 | 163aa | OTTHUMP00000249664 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EDC3-010 | OTTHUMT00000421214.2 | 658 | 177aa | OTTHUMP00000249665 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EDC3-014 | OTTHUMT00000421216.2 | 588 | 92aa | OTTHUMP00000249667 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EDC3-018 | OTTHUMT00000421244.2 | 574 | 123aa | OTTHUMP00000249683 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EDC3-013 | OTTHUMT00000421215.2 | 573 | 101aa | OTTHUMP00000249666 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EDC3-012 | OTTHUMT00000421218.3 | 479 | 31aa | OTTHUMP00000249668 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EDC3-015 | OTTHUMT00000421241.2 | 471 | 54aa | OTTHUMP00000249680 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EDC3-007 | OTTHUMT00000421205.2 | 204 | 68aa | OTTHUMP00000249660 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| EDC3-002 | OTTHUMT00000421200.1 | 1862 | 57aa | OTTHUMP00000249655 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| EDC3-008 | OTTHUMT00000421219.1 | 559 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| EDC3-006 | OTTHUMT00000421203.1 | 533 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| EDC3-011 | OTTHUMT00000421217.1 | 379 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
