Description
major histocompatibility complex, class I, C
Location
Chromosome 6-MANN: 2,520,093-2,523,464 reverse strand.
View alleles of this gene on alternate assemblies
About this gene
This gene has 12 transcripts (splice variants), 6 gene alleles, 143 orthologues and 42 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HLA-C-001 | OTTHUMT00000311078.2 | 1578 | 366aa | OTTHUMP00000193709 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | O78179 | |
| HLA-C-003 | OTTHUMT00000311080.2 | 1552 | 372aa | OTTHUMP00000193711 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A140T912 | |
| HLA-C-004 | OTTHUMT00000311081.2 | 1530 | 397aa | OTTHUMP00000193712 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A140T930 | |
| HLA-C-002 | OTTHUMT00000311079.3 | 1460 | 339aa | OTTHUMP00000193710 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A140T937 | |
| HLA-C-007 | OTTHUMT00000311084.2 | 782 | 261aa | OTTHUMP00000193713 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| HLA-C-006 | OTTHUMT00000311089.2 | 1536 | 131aa | OTTHUMP00000233536 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| HLA-C-009 | OTTHUMT00000311086.1 | 966 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HLA-C-005 | OTTHUMT00000311082.1 | 1874 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HLA-C-010 | OTTHUMT00000311087.1 | 1276 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HLA-C-008 | OTTHUMT00000311085.1 | 1073 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HLA-C-012 | OTTHUMT00000311083.1 | 858 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HLA-C-011 | OTTHUMT00000311088.1 | 752 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
