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Description

breast cancer 1, early onset

Synonyms

RNF53, PPP1R53, BRCC1, FANCS

Location

Chromosome 17: 43,044,295-43,170,245 reverse strand.

VEGA65:CM000679.2

About this gene

This gene has 30 transcripts (splice variants).

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
BRCA1-001OTTHUMT00000348798.270941863aaOTTHUMP00000212143
 
Protein coding
CCDS11453P38398
BRCA1-005OTTHUMT00000348802.259361884aaOTTHUMP00000212147
 
Protein coding
CCDS11456-
BRCA1-006OTTHUMT00000348803.157321816aaOTTHUMP00000212148
 
Protein coding
CCDS11459-
BRCA1-007OTTHUMT00000348804.13273699aaOTTHUMP00000212149
 
Protein coding
CCDS11455-
BRCA1-014OTTHUMT00000348811.32379759aaOTTHUMP00000212155
 
Protein coding
CCDS11454A0A024R1V0
BRCA1-012OTTHUMT00000348809.244971399aaOTTHUMP00000275457
 
Protein coding
-Q5YLB2
BRCA1-029OTTHUMT00000476275.13668721aaOTTHUMP00000275469
 
Protein coding
-A0A024R1Z8
BRCA1-030OTTHUMT00000488553.22534798aaOTTHUMP00000281524
 
Protein coding
-A0A0U1RRA9 CDS 3' incomplete
BRCA1-011OTTHUMT00000348808.22108649aaOTTHUMP00000212153
 
Protein coding
-E7EWN5 CDS 3' incomplete
BRCA1-004OTTHUMT00000348801.21980622aaOTTHUMP00000212146
 
Protein coding
-E9PH68 CDS 3' incomplete
BRCA1-009OTTHUMT00000348806.11972623aaOTTHUMP00000212151
 
Protein coding
-E7EUM2 CDS 3' incomplete
BRCA1-008OTTHUMT00000348805.21948572aaOTTHUMP00000212150
 
Protein coding
-B7ZA85 CDS 3' incomplete
BRCA1-013OTTHUMT00000348810.21612473aaOTTHUMP00000212154
 
Protein coding
-Q3B891 CDS 3' incomplete
BRCA1-015OTTHUMT00000348812.21495498aaOTTHUMP00000212156
 
Protein coding
-H0Y8B8 CDS 5' and 3' incomplete
BRCA1-024OTTHUMT00000453114.11282354aaOTTHUMP00000265375
 
Protein coding
-K7EPC7
BRCA1-018OTTHUMT00000348815.2958319aaOTTHUMP00000212159
 
Protein coding
-H0Y8D8 CDS 5' and 3' incomplete
BRCA1-019OTTHUMT00000348816.3800266aaOTTHUMP00000212160
 
Protein coding
-H0Y881 CDS 5' and 3' incomplete
BRCA1-023OTTHUMT00000453113.1781173aaOTTHUMP00000265374
 
Protein coding
-C6YB45
BRCA1-003OTTHUMT00000348800.3779177aaOTTHUMP00000212145
 
Protein coding
-C9IZW4 CDS 3' incomplete
BRCA1-017OTTHUMT00000348814.3769222aaOTTHUMP00000212158
 
Protein coding
-E7EQW4 CDS 3' incomplete
BRCA1-022OTTHUMT00000348819.2726242aaOTTHUMP00000212162
 
Protein coding
-H0Y850 CDS 5' and 3' incomplete
BRCA1-027OTTHUMT00000475526.271823aaOTTHUMP00000275365
 
Protein coding
--CDS 3' incomplete
BRCA1-025OTTHUMT00000453115.156396aaOTTHUMP00000265376
 
Protein coding
-K7EJW3
BRCA1-016OTTHUMT00000348813.245598aaOTTHUMP00000212157
 
Protein coding
-E7ENB7 CDS 3' incomplete
BRCA1-026OTTHUMT00000453116.21312437aaOTTHUMP00000265377
 
Non stop decay
-A0A0A0MSN1 CDS 5' incomplete
BRCA1-010OTTHUMT00000348807.1569363aaOTTHUMP00000212152
 
Nonsense mediated decay
--
BRCA1-002OTTHUMT00000348799.1158459aaOTTHUMP00000212144
 
Nonsense mediated decay
-E9PC22
BRCA1-020OTTHUMT00000348817.158263aaOTTHUMP00000212161
 
Nonsense mediated decay
--
BRCA1-028OTTHUMT00000475525.1375No protein-
 
Processed transcript
--
BRCA1-021OTTHUMT00000348818.1561No protein-
 
Retained intron
--

Gene-based displays