Description
homogentisate 1,2-dioxygenase (homogentisate oxidase)
Synonyms
HGO
Location
Chromosome 3: 120,628,173-120,682,571 reverse strand.
VEGA68:CM000665.2
About this gene
This gene has 10 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HGD-001 | OTTHUMT00000355410.1 | 2005 | 445aa | OTTHUMP00000215350 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3000 | Q93099 | |
| HGD-006 | OTTHUMT00000355415.1 | 683 | 145aa | OTTHUMP00000215352 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C576 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HGD-005 | OTTHUMT00000355414.2 | 565 | 88aa | OTTHUMP00000215351 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C4R8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HGD-010 | OTTHUMT00000355419.3 | 462 | 142aa | OTTHUMP00000215354 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JTX9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HGD-009 | OTTHUMT00000355418.1 | 631 | 98aa | OTTHUMP00000215353 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H7C5G7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HGD-003 | OTTHUMT00000355412.1 | 572 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HGD-007 | OTTHUMT00000355416.1 | 528 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HGD-002 | OTTHUMT00000355411.1 | 656 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HGD-004 | OTTHUMT00000355413.1 | 528 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HGD-008 | OTTHUMT00000355417.1 | 444 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
