Description
Fraser syndrome 1
Synonyms
KIAA1500, FLJ22031, FLJ14927
Location
Chromosome 4: 78,057,570-78,544,269 forward strand.
VEGA68:CM000666.2
About this gene
This gene has 10 transcripts (splice variants), 6 orthologues and 4 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| FRAS1-008 | OTTHUMT00000362862.2 | 15624 | 4012aa | OTTHUMP00000219233 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54771 | - | |
| FRAS1-001 | OTTHUMT00000362706.2 | 7142 | 1976aa | OTTHUMP00000219178 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54772 | - | |
| FRAS1-004 | OTTHUMT00000362709.1 | 2217 | 666aa | OTTHUMP00000219180 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y9A6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| FRAS1-005 | OTTHUMT00000362710.1 | 2169 | 652aa | OTTHUMP00000219181 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y9C9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| FRAS1-007 | OTTHUMT00000362861.1 | 2125 | 426aa | OTTHUMP00000219232 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y8V2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| FRAS1-002 | OTTHUMT00000362707.1 | 3330 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| FRAS1-009 | OTTHUMT00000362863.1 | 2432 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| FRAS1-006 | OTTHUMT00000362750.1 | 1672 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| FRAS1-003 | OTTHUMT00000362708.1 | 2297 | 39aa | OTTHUMP00000219179 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| FRAS1-010 | OTTHUMT00000362864.1 | 564 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
