Description
chromodomain helicase DNA binding protein 1
Location
Chromosome 5: 98,853,985-98,928,957 reverse strand.
VEGA68:CM000667.2
About this gene
This gene has 11 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CHD1-001 | OTTHUMT00000370295.3 | 8095 | 1710aa | OTTHUMP00000222625 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34204 | O14646 | |
| CHD1-008 | OTTHUMT00000370302.2 | 817 | 272aa | OTTHUMP00000275678 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| CHD1-005 | OTTHUMT00000370299.1 | 848 | 22aa | OTTHUMP00000222626 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CHD1-006 | OTTHUMT00000370300.1 | 736 | 113aa | OTTHUMP00000222627 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CHD1-002 | OTTHUMT00000370296.1 | 2955 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHD1-003 | OTTHUMT00000370297.1 | 1968 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHD1-007 | OTTHUMT00000370301.1 | 786 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHD1-011 | OTTHUMT00000370305.1 | 758 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHD1-009 | OTTHUMT00000370303.1 | 724 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHD1-004 | OTTHUMT00000370298.1 | 599 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHD1-010 | OTTHUMT00000370304.1 | 434 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
