Description
IK cytokine, down-regulator of HLA II
Synonyms
RER, RED
Location
Chromosome 5: 140,647,058-140,662,479 forward strand.
VEGA68:CM000667.2
About this gene
This gene has 12 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
IK-001 | OTTHUMT00000372897.1 | 1962 | 557aa | OTTHUMP00000223684 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47280 | Q13123 | |
IK-010 | OTTHUMT00000372906.2 | 868 | 267aa | OTTHUMP00000223689 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EQZ7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
IK-006 | OTTHUMT00000372902.2 | 690 | 212aa | OTTHUMP00000223686 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6REL4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
IK-005 | OTTHUMT00000372901.2 | 569 | 107aa | OTTHUMP00000223685 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RCQ4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
IK-009 | OTTHUMT00000372905.2 | 489 | 140aa | OTTHUMP00000223688 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RAY9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
IK-003 | OTTHUMT00000372899.1 | 1759 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
IK-002 | OTTHUMT00000372898.1 | 1442 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
IK-008 | OTTHUMT00000372904.1 | 540 | 73aa | OTTHUMP00000223687 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
IK-013 | OTTHUMT00000374270.1 | 556 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
IK-004 | OTTHUMT00000372900.1 | 1964 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
IK-011 | OTTHUMT00000372907.1 | 493 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
IK-007 | OTTHUMT00000372903.1 | 258 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |