Description
surfactant protein C
Synonyms
BRICD6, SP-C, SMDP2, PSP-C
Location
Chromosome 8: 22,156,913-22,164,481 forward strand.
VEGA68:CM000670.2
About this gene
This gene has 14 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
SFTPC-003 | OTTHUMT00000375365.1 | 1046 | 191aa | OTTHUMP00000224821 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55209 | C9JYF6 | |
SFTPC-001 | OTTHUMT00000375364.1 | 997 | 197aa | OTTHUMP00000224820 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43722 | A0A0S2Z4Q0 | |
SFTPC-007 | OTTHUMT00000375370.1 | 681 | 144aa | OTTHUMP00000224825 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS83259 | E5RI64 | |
SFTPC-010 | OTTHUMT00000375369.1 | 921 | 150aa | OTTHUMP00000224824 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RI92 | |
SFTPC-011 | OTTHUMT00000375366.1 | 773 | 161aa | OTTHUMP00000224822 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JYF6 | |
SFTPC-006 | OTTHUMT00000375367.1 | 519 | 155aa | OTTHUMP00000224823 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RG20 | |
SFTPC-008 | OTTHUMT00000375371.2 | 395 | 124aa | OTTHUMP00000224826 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RHW5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SFTPC-002 | OTTHUMT00000375362.1 | 1496 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SFTPC-004 | OTTHUMT00000375368.1 | 634 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SFTPC-014 | OTTHUMT00000375360.1 | 1000 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SFTPC-005 | OTTHUMT00000375363.1 | 993 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SFTPC-013 | OTTHUMT00000375361.1 | 538 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SFTPC-009 | OTTHUMT00000375372.1 | 377 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SFTPC-012 | OTTHUMT00000375373.1 | 227 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |