Description
leucine-rich repeat kinase 1
Synonyms
KIAA1790, FLJ23119, Roco1, RIPK6
Location
Chromosome 15: 100,919,215-101,078,254 forward strand.
VEGA68:CM000677.2
About this gene
This gene has 11 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LRRK1-003 | OTTHUMT00000384567.2 | 7671 | 2015aa | OTTHUMP00000230021 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42086 | Q38SD2 | |
| LRRK1-004 | OTTHUMT00000384564.2 | 1241 | 264aa | OTTHUMP00000230019 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| LRRK1-007 | OTTHUMT00000384565.2 | 569 | 32aa | OTTHUMP00000230020 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LRRK1-005 | OTTHUMT00000384571.3 | 11632 | 660aa | OTTHUMP00000230024 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YEW1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| LRRK1-001 | OTTHUMT00000384568.1 | 6494 | 689aa | OTTHUMP00000230022 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LRRK1-002 | OTTHUMT00000384569.1 | 6015 | 650aa | OTTHUMP00000230023 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LRRK1-006 | OTTHUMT00000384573.1 | 2790 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LRRK1-010 | OTTHUMT00000384572.2 | 737 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LRRK1-008 | OTTHUMT00000384566.1 | 679 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LRRK1-009 | OTTHUMT00000384570.2 | 614 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LRRK1-011 | OTTHUMT00000397592.1 | 493 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
