Description
chromosome 12 open reading frame 4chromosome 12 open reading frame 48
Location
Chromosome 12: 102,120,185-102,197,520 forward strand.
VEGA68:CM000674.2
About this gene
This gene has 13 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
C12orf48-001 | OTTHUMT00000397030.3 | 3014 | 579aa | OTTHUMP00000237310 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9090 | Q9NWS1 | |
C12orf48-002 | OTTHUMT00000397026.1 | 2452 | 656aa | OTTHUMP00000237306 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81728 | B4DZ31 | |
C12orf48-006 | OTTHUMT00000397031.1 | 1916 | 498aa | OTTHUMP00000237311 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81730 | A0A024RBG0 | |
C12orf48-007 | OTTHUMT00000397029.1 | 976 | 133aa | OTTHUMP00000237309 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81729 | - | |
C12orf48-009 | OTTHUMT00000397036.1 | 2212 | 269aa | OTTHUMP00000237313 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KQY3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
C12orf48-010 | OTTHUMT00000397037.1 | 2133 | 264aa | OTTHUMP00000237314 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
C12orf48-008 | OTTHUMT00000397027.1 | 992 | 183aa | OTTHUMP00000237307 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
C12orf48-005 | OTTHUMT00000397032.1 | 2158 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
C12orf48-003 | OTTHUMT00000397035.1 | 2319 | 64aa | OTTHUMP00000237312 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
C12orf48-012 | OTTHUMT00000397028.1 | 835 | 144aa | OTTHUMP00000237308 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
C12orf48-011 | OTTHUMT00000397038.1 | 1465 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
C12orf48-004 | OTTHUMT00000397033.1 | 1061 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
C12orf48-013 | OTTHUMT00000397034.1 | 833 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |